Hi David,
AstroEQ is pretty much at the mercy of EQMOD, it moves where it is told. I'm not entirely sure of the differences between what EQMOD will make a fork mount do and what it actually needs to do, and then on top of that I am not sure if it would be possible to get the mount to move in a way EQMOD was not expecting whilst still making it think it is in the right place.